Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EYD74240.1 | EYD74241.1 | Rumeso_04297 | Rumeso_04298 | Hypothetical protein. | Halocyanin. | 0.773 |
EYD74240.1 | EYD74242.1 | Rumeso_04297 | Rumeso_04299 | Hypothetical protein. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
EYD74241.1 | EYD74240.1 | Rumeso_04298 | Rumeso_04297 | Halocyanin. | Hypothetical protein. | 0.773 |
EYD74241.1 | EYD74242.1 | Rumeso_04298 | Rumeso_04299 | Halocyanin. | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
EYD74241.1 | EYD74482.1 | Rumeso_04298 | Rumeso_03956 | Halocyanin. | Ferredoxin, 2Fe-2S. | 0.576 |
EYD74241.1 | EYD74927.1 | Rumeso_04298 | Rumeso_03568 | Halocyanin. | Hypothetical protein; FIG00443700. | 0.640 |
EYD74241.1 | EYD75086.1 | Rumeso_04298 | Rumeso_03414 | Halocyanin. | Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase. | 0.591 |
EYD74241.1 | EYD75648.1 | Rumeso_04298 | Rumeso_02735 | Halocyanin. | Hypothetical protein. | 0.640 |
EYD74241.1 | EYD75649.1 | Rumeso_04298 | Rumeso_02736 | Halocyanin. | Hypothetical protein. | 0.640 |
EYD74241.1 | EYD76520.1 | Rumeso_04298 | Rumeso_01941 | Halocyanin. | Hypothetical protein. | 0.636 |
EYD74241.1 | EYD77238.1 | Rumeso_04298 | Rumeso_01185 | Halocyanin. | Copper-containing nitrite reductase; Belongs to the multicopper oxidase family. | 0.948 |
EYD74241.1 | EYD77243.1 | Rumeso_04298 | Rumeso_01190 | Halocyanin. | Pseudoazurin precursor. | 0.734 |
EYD74242.1 | EYD74240.1 | Rumeso_04299 | Rumeso_04297 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.773 |
EYD74242.1 | EYD74241.1 | Rumeso_04299 | Rumeso_04298 | RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Halocyanin. | 0.773 |
EYD74482.1 | EYD74241.1 | Rumeso_03956 | Rumeso_04298 | Ferredoxin, 2Fe-2S. | Halocyanin. | 0.576 |
EYD74482.1 | EYD75086.1 | Rumeso_03956 | Rumeso_03414 | Ferredoxin, 2Fe-2S. | Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase. | 0.479 |
EYD74482.1 | EYD76520.1 | Rumeso_03956 | Rumeso_01941 | Ferredoxin, 2Fe-2S. | Hypothetical protein. | 0.942 |
EYD74482.1 | EYD77243.1 | Rumeso_03956 | Rumeso_01190 | Ferredoxin, 2Fe-2S. | Pseudoazurin precursor. | 0.576 |
EYD74927.1 | EYD74241.1 | Rumeso_03568 | Rumeso_04298 | Hypothetical protein; FIG00443700. | Halocyanin. | 0.640 |
EYD74927.1 | EYD77243.1 | Rumeso_03568 | Rumeso_01190 | Hypothetical protein; FIG00443700. | Pseudoazurin precursor. | 0.640 |
page 1 of 3