STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD74241.1Halocyanin. (175 aa)    
Predicted Functional Partners:
EYD77238.1
Copper-containing nitrite reductase; Belongs to the multicopper oxidase family.
 
 
 0.948
EYD74240.1
Hypothetical protein.
       0.773
EYD74242.1
RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.773
EYD77243.1
Pseudoazurin precursor.
  
     0.734
EYD75648.1
Hypothetical protein.
   
   0.640
EYD75649.1
Hypothetical protein.
   
   0.640
EYD74927.1
Hypothetical protein; FIG00443700.
   
   0.640
EYD76520.1
Hypothetical protein.
   
 
 0.636
EYD75086.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase.
    
 
 0.591
EYD74482.1
Ferredoxin, 2Fe-2S.
    
 
 0.576
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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