STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD74009.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EYD74010.1
Hypothetical protein; FIG01164982.
 
     0.927
EYD74012.1
Helicase (Snf2/Rad54 family).
 
   0.897
EYD74011.1
Hypothetical protein; FIG01164982.
 
     0.880
EYD74013.1
Hypothetical protein VrlP.
 
    0.849
EYD78228.1
Glycerol kinase; Belongs to the FGGY kinase family.
   
  0.783
EYD76607.1
Glycerol kinase; Belongs to the FGGY kinase family.
   
  0.783
EYD77307.1
DNA polymerase I; Overlaps another CDS with the same product name.
  
  
 0.742
EYD77308.1
DNA polymerase I; Overlaps another CDS with the same product name.
  
  
 0.742
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.742
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
  
 0.679
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.