Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EYD72907.1 | EYD74020.1 | Rumeso_04783 | Rumeso_04391 | Acetylpolyamine aminohydrolase. | Hypothetical protein. | 0.743 |
| EYD72907.1 | EYD74236.1 | Rumeso_04783 | Rumeso_04293 | Acetylpolyamine aminohydrolase. | Chemotaxis protein methyltransferase CheR. | 0.438 |
| EYD72907.1 | EYD74991.1 | Rumeso_04783 | Rumeso_03456 | Acetylpolyamine aminohydrolase. | Deacetylase; Including yeast histone deacetylase and acetoin utilization protein. | 0.642 |
| EYD73878.1 | EYD74020.1 | Rumeso_04475 | Rumeso_04391 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.796 |
| EYD73878.1 | EYD77754.1 | Rumeso_04475 | Rumeso_00481 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III delta prime subunit. | 0.998 |
| EYD74020.1 | EYD72907.1 | Rumeso_04391 | Rumeso_04783 | Hypothetical protein. | Acetylpolyamine aminohydrolase. | 0.743 |
| EYD74020.1 | EYD73878.1 | Rumeso_04391 | Rumeso_04475 | Hypothetical protein. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.796 |
| EYD74020.1 | EYD74236.1 | Rumeso_04391 | Rumeso_04293 | Hypothetical protein. | Chemotaxis protein methyltransferase CheR. | 0.761 |
| EYD74020.1 | EYD74991.1 | Rumeso_04391 | Rumeso_03456 | Hypothetical protein. | Deacetylase; Including yeast histone deacetylase and acetoin utilization protein. | 0.743 |
| EYD74020.1 | EYD74998.1 | Rumeso_04391 | Rumeso_03422 | Hypothetical protein. | Hypothetical protein. | 0.846 |
| EYD74020.1 | EYD75205.1 | Rumeso_04391 | Rumeso_03301 | Hypothetical protein. | Acetylspermidine deacetylase, Deacetylase; Including yeast histone deacetylase and acetoin utilization protein. | 0.743 |
| EYD74020.1 | EYD76607.1 | Rumeso_04391 | Rumeso_01565 | Hypothetical protein. | Glycerol kinase; Belongs to the FGGY kinase family. | 0.768 |
| EYD74020.1 | EYD77436.1 | Rumeso_04391 | Rumeso_00985 | Hypothetical protein. | Peptidase C14, caspase catalytic subunit p20. | 0.846 |
| EYD74020.1 | EYD77754.1 | Rumeso_04391 | Rumeso_00481 | Hypothetical protein. | DNA polymerase III delta prime subunit. | 0.755 |
| EYD74020.1 | EYD78228.1 | Rumeso_04391 | Rumeso_00057 | Hypothetical protein. | Glycerol kinase; Belongs to the FGGY kinase family. | 0.768 |
| EYD74236.1 | EYD72907.1 | Rumeso_04293 | Rumeso_04783 | Chemotaxis protein methyltransferase CheR. | Acetylpolyamine aminohydrolase. | 0.438 |
| EYD74236.1 | EYD74020.1 | Rumeso_04293 | Rumeso_04391 | Chemotaxis protein methyltransferase CheR. | Hypothetical protein. | 0.761 |
| EYD74236.1 | EYD74991.1 | Rumeso_04293 | Rumeso_03456 | Chemotaxis protein methyltransferase CheR. | Deacetylase; Including yeast histone deacetylase and acetoin utilization protein. | 0.516 |
| EYD74236.1 | EYD75205.1 | Rumeso_04293 | Rumeso_03301 | Chemotaxis protein methyltransferase CheR. | Acetylspermidine deacetylase, Deacetylase; Including yeast histone deacetylase and acetoin utilization protein. | 0.507 |
| EYD74236.1 | EYD76607.1 | Rumeso_04293 | Rumeso_01565 | Chemotaxis protein methyltransferase CheR. | Glycerol kinase; Belongs to the FGGY kinase family. | 0.528 |
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