Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EYD73982.1 | EYD74841.1 | Rumeso_04451 | Rumeso_03608 | Hypothetical protein. | Adenylate/guanylate cyclase. | 0.890 |
EYD73982.1 | EYD74871.1 | Rumeso_04451 | Rumeso_03512 | Hypothetical protein. | Hypothetical protein. | 0.905 |
EYD73982.1 | EYD75520.1 | Rumeso_04451 | Rumeso_02866 | Hypothetical protein. | Hypothetical protein. | 0.868 |
EYD73982.1 | EYD75582.1 | Rumeso_04451 | Rumeso_02858 | Hypothetical protein. | Hypothetical protein. | 0.885 |
EYD73982.1 | EYD75598.1 | Rumeso_04451 | Rumeso_02837 | Hypothetical protein. | Transcriptional regulatory protein-like type. | 0.905 |
EYD73982.1 | EYD76033.1 | Rumeso_04451 | Rumeso_02462 | Hypothetical protein. | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 0.923 |
EYD73982.1 | EYD76034.1 | Rumeso_04451 | Rumeso_02463 | Hypothetical protein. | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 0.923 |
EYD73982.1 | EYD76923.1 | Rumeso_04451 | Rumeso_01445 | Hypothetical protein. | Hypothetical protein. | 0.872 |
EYD73982.1 | alaS | Rumeso_04451 | Rumeso_01620 | Hypothetical protein. | Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.948 |
EYD73982.1 | rpoA | Rumeso_04451 | Rumeso_01777 | Hypothetical protein. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.893 |
EYD74841.1 | EYD73982.1 | Rumeso_03608 | Rumeso_04451 | Adenylate/guanylate cyclase. | Hypothetical protein. | 0.890 |
EYD74841.1 | EYD74871.1 | Rumeso_03608 | Rumeso_03512 | Adenylate/guanylate cyclase. | Hypothetical protein. | 0.916 |
EYD74841.1 | EYD75520.1 | Rumeso_03608 | Rumeso_02866 | Adenylate/guanylate cyclase. | Hypothetical protein. | 0.868 |
EYD74841.1 | EYD75582.1 | Rumeso_03608 | Rumeso_02858 | Adenylate/guanylate cyclase. | Hypothetical protein. | 0.891 |
EYD74841.1 | EYD75598.1 | Rumeso_03608 | Rumeso_02837 | Adenylate/guanylate cyclase. | Transcriptional regulatory protein-like type. | 0.928 |
EYD74841.1 | EYD76033.1 | Rumeso_03608 | Rumeso_02462 | Adenylate/guanylate cyclase. | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 0.923 |
EYD74841.1 | EYD76034.1 | Rumeso_03608 | Rumeso_02463 | Adenylate/guanylate cyclase. | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 0.923 |
EYD74841.1 | EYD76923.1 | Rumeso_03608 | Rumeso_01445 | Adenylate/guanylate cyclase. | Hypothetical protein. | 0.872 |
EYD74841.1 | alaS | Rumeso_03608 | Rumeso_01620 | Adenylate/guanylate cyclase. | Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.948 |
EYD74841.1 | rpoA | Rumeso_03608 | Rumeso_01777 | Adenylate/guanylate cyclase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.893 |
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