STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD73886.1Flagellar protein FlgJ, putative. (91 aa)    
Predicted Functional Partners:
EYD73884.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.993
EYD73885.1
Hypothetical protein.
 
  
 0.992
EYD77064.1
Flagellar motor switch protein FliG.
 
  
 0.982
EYD76387.1
Anti-sigma F factor antagonist (spoIIAA-2), Anti-sigma B factor antagonist RsbV; Belongs to the anti-sigma-factor antagonist family.
   
    0.950
EYD76388.1
Anti-sigma B factor, putative.
   
    0.939
EYD76382.1
Response regulator.
   
    0.926
EYD74790.1
Hypothetical protein.
  
    0.913
EYD73887.1
Hypothetical protein.
 
     0.883
EYD74586.1
Methyl-accepting chemotaxis protein.
 
  
 0.871
EYD74339.1
Chemotaxis protein methyltransferase CheR.
  
  
 0.785
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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