STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD73900.1FAD binding protein domain protein. (491 aa)    
Predicted Functional Partners:
EYD73902.1
Hypothetical protein.
     0.974
EYD73901.1
Hypothetical protein.
       0.799
EYD78048.1
Acyltransferase family protein associated with ethylmalonyl-CoA pathway.
    
 0.749
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.742
EYD74524.1
Electron transfer flavoprotein, beta subunit.
 
 
 0.732
EYD76365.1
Glutamate synthase [NADPH] large chain.
    
 0.718
EYD76366.1
Glutamate synthase [NADPH] large chain.
    
 0.718
EYD75017.1
L-lactate dehydrogenase.
 
 0.697
EYD74525.1
Electron transfer flavoprotein, alpha subunit.
  
 
 0.694
EYD74514.1
L-lactate dehydrogenase.
 
 0.693
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.