STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD73859.1Alcohol dehydrogenase, zinc-binding protein domain protein. (299 aa)    
Predicted Functional Partners:
EYD75467.1
Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
  
 0.714
EYD74772.1
And related Zn-dependent dehydrogenases.
  
  
  0.586
EYD75533.1
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
  
  
 0.546
EYD76473.1
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
  
  
 0.545
EYD76260.1
Citrate synthase (si); Belongs to the citrate synthase family.
   
 0.508
EYD76979.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.493
EYD78103.1
Malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.469
EYD75956.1
Putative methyltransferase.
     
 0.463
EYD73545.1
2-hydroxy-3-oxopropionate reductase.
  
  
  0.463
EYD74521.1
Quinone oxidoreductase.
 
  
 
0.461
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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