STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD72909.1ABC transporter, periplasmic spermidine putrescine-binding protein PotD; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (341 aa)    
Predicted Functional Partners:
EYD72910.1
Spermidine Putrescine ABC transporter permease component potC; TC 3.A.1.11.1.
 
  0.995
EYD75571.1
Spermidine Putrescine ABC transporter permease component potC; TC_3.A.1.11.1.
 
  0.980
EYD76565.1
ABC spermidine/putrescine transporter, inner membrane subunit.
 
  0.969
EYD72911.1
Spermidine Putrescine ABC transporter permease component PotB; TC 3.A.1.11.1.
 
 
  0.933
EYD77025.1
ABC transporter permease component.
 
  0.927
fbpC
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 
  0.914
EYD73579.1
Spermidine Putrescine ABC transporter permease component potC; TC_3.A.1.11.1.
 
  0.912
EYD76088.1
Spermidine Putrescine ABC transporter permease component potC; TC_3.A.1.11.1.
 
  0.909
EYD77758.1
Polyamine ABC transporter, permease protein.
 
  0.902
EYD76220.1
Putative ABC transporter permease.
 
  0.901
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.