STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhACOG0334: Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (448 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase (NADPH) large subunit; COG0069: Glutamate synthase domain 2.
  
 0.986
glnA-2
COG0174: Glutamine synthetase.
  
 
 0.949
glnA
COG0174: Glutamine synthetase.
  
 
 0.946
gltD
Glutamate synthase (NADPH) small subunit; COG0493: NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.929
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.928
BLA_1291
GMP reductase; COG0516: IMP dehydrogenase/GMP reductase.
  
 
 0.908
BLA_1362
Probable aminotransferase; COG0436: Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.908
BLA_0243
Probable aminotransferase; COG0436: Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.905
aspC
COG0436: Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.905
gltA
COG0372: Citrate synthase; Belongs to the citrate synthase family.
   
 0.904
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.