Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BLA_0067 | BLA_0068 | Conserved hypothetical protein. | COG0705: Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.688 |
BLA_0068 | BLA_0067 | COG0705: Uncharacterized membrane protein (homolog of Drosophila rhomboid). | Conserved hypothetical protein. | 0.688 |
BLA_0068 | BLA_0340 | COG0705: Uncharacterized membrane protein (homolog of Drosophila rhomboid). | COG0212: 5-formyltetrahydrofolate cyclo-ligase. | 0.514 |
BLA_0068 | BLA_0842 | COG0705: Uncharacterized membrane protein (homolog of Drosophila rhomboid). | Band 7 protein precursor; COG0330: Membrane protease subunits, stomatin/prohibitin homologs. | 0.845 |
BLA_0340 | BLA_0068 | COG0212: 5-formyltetrahydrofolate cyclo-ligase. | COG0705: Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.514 |
BLA_0842 | BLA_0068 | Band 7 protein precursor; COG0330: Membrane protease subunits, stomatin/prohibitin homologs. | COG0705: Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.845 |