STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scrTSucrose symporter; COG0477: Permeases of the major facilitator superfamily. (433 aa)    
Predicted Functional Partners:
scrP
Sucrose phosphorylase; COG0366: Glycosidases.
 
  
 0.667
scrR
Sucrose operon repressor ScrR; COG1609: Transcriptional regulators.
     
 0.523
BLA_0050
COG1609: Transcriptional regulators.
     
 0.485
BLA_0054
COG1609: Transcriptional regulators.
     
 0.485
BLA_0455
COG1609: Transcriptional regulators.
     
 0.485
BLA_0817
COG1609: Transcriptional regulators.
     
 0.485
BLA_0900
COG1609: Transcriptional regulators.
     
 0.485
BLA_0912
COG1609: Transcriptional regulators.
     
 0.485
BLA_1514
COG1609: Transcriptional regulators.
     
 0.485
livF-3
COG0683: ABC-type branched-chain amino acid transport systems, periplasmic component.
       0.416
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.