Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BLA_0102 | BLA_0168 | COG3077: DNA-damage-inducible protein J. | Putative membrane protein. | 0.518 |
BLA_0102 | BLA_0169 | COG3077: DNA-damage-inducible protein J. | COG0619: ABC-type cobalt transport system, permease component CbiQ and related transporters. | 0.509 |
BLA_0102 | BLA_0170 | COG3077: DNA-damage-inducible protein J. | ATP binding protein of ABC transporter; COG1122: ABC-type cobalt transport system, ATPase component. | 0.442 |
BLA_0168 | BLA_0102 | Putative membrane protein. | COG3077: DNA-damage-inducible protein J. | 0.518 |
BLA_0168 | BLA_0169 | Putative membrane protein. | COG0619: ABC-type cobalt transport system, permease component CbiQ and related transporters. | 0.923 |
BLA_0168 | BLA_0170 | Putative membrane protein. | ATP binding protein of ABC transporter; COG1122: ABC-type cobalt transport system, ATPase component. | 0.889 |
BLA_0169 | BLA_0102 | COG0619: ABC-type cobalt transport system, permease component CbiQ and related transporters. | COG3077: DNA-damage-inducible protein J. | 0.509 |
BLA_0169 | BLA_0168 | COG0619: ABC-type cobalt transport system, permease component CbiQ and related transporters. | Putative membrane protein. | 0.923 |
BLA_0169 | BLA_0170 | COG0619: ABC-type cobalt transport system, permease component CbiQ and related transporters. | ATP binding protein of ABC transporter; COG1122: ABC-type cobalt transport system, ATPase component. | 0.970 |
BLA_0170 | BLA_0102 | ATP binding protein of ABC transporter; COG1122: ABC-type cobalt transport system, ATPase component. | COG3077: DNA-damage-inducible protein J. | 0.442 |
BLA_0170 | BLA_0168 | ATP binding protein of ABC transporter; COG1122: ABC-type cobalt transport system, ATPase component. | Putative membrane protein. | 0.889 |
BLA_0170 | BLA_0169 | ATP binding protein of ABC transporter; COG1122: ABC-type cobalt transport system, ATPase component. | COG0619: ABC-type cobalt transport system, permease component CbiQ and related transporters. | 0.970 |