STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLA_0200Putative membrane protein. (157 aa)    
Predicted Functional Partners:
BLA_0198
Conserved hypothetical protein.
       0.819
BLA_0199
TadE family protein.
       0.819
BLA_0197
Type II secretion system protein precursor; COG2064: Flp pilus assembly protein TadC.
 
     0.701
dnaX
COG2812: DNA polymerase III, gamma/tau subunits.
       0.655
BLA_0195
Type II secretion system protein E; COG4962: Flp pilus assembly protein, ATPase CpaF.
     
 0.654
BLA_0196
Type II secretion system protein; COG4965: Flp pilus assembly protein TadB.
       0.653
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.621
BLA_0835
COG3173: Predicted aminoglycoside phosphotransferase.
  
     0.547
BLA_0210
Possible pre-pilin peptidase.
  
     0.518
BLA_0808
Wag31; COG3599: Cell division initiation protein.
  
     0.503
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.