STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLA_0726Putative ABC transport system integral membrane protein; COG0577: ABC-type antimicrobial peptide transport system, permease component. (944 aa)    
Predicted Functional Partners:
BLA_0725
Putative ABC transporter ATP-binding protein; COG1136: ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.978
BLA_0155
Putative ABC transporter ATP-binding protein; COG1136: ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.910
BLA_0988
Possible ATP binding protein of ABC transporter; COG1136: ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.897
BLA_0283
ATP-binding protein of ABC transporter system; COG1136: ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.752
BLA_0876
Possible ATP binding protein of ABC transporter; COG1136: ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.745
xerC
Probable integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
    0.714
BLA_1238
ABC transporter domain protein; COG1136: ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.703
BLA_1346
COG1560: Lauroyl/myristoyl acyltransferase.
  
    0.700
BLA_0727
Conserved hypothetical protein.
       0.682
BLA_1345
Putative sugar transferase; COG0438: Glycosyltransferase.
  
    0.623
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.