STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLA_0756COG0524: Sugar kinases, ribokinase family. (298 aa)    
Predicted Functional Partners:
cscA
Beta-(1-2)-fructofuranosidase; COG1621: Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 32 family.
 
 
 0.930
pgi
COG0166: Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.912
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 0.910
manA
COG1482: Phosphomannose isomerase.
    
 0.908
BLA_0907
Putative glycosilase; COG0366: Glycosidases.
   
 0.907
xylA
COG2115: Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.906
aglA
Probable alpha-1,4-glucosidase; COG0366: Glycosidases.
     
  0.900
aglA-2
Probable alpha-1,4-glucosidase; COG0366: Glycosidases.
     
  0.900
BLA_0648
Mannan endo-1,4-beta-mannosidase precursor; COG2730: Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
  0.802
BLA_0755
Probable transcriptional repressor in the Rok (NagC/XylR) family; COG1940: Transcriptional regulator/sugar kinase.
  
  
 0.762
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.