STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLA_0758COG0582: Integrase; Belongs to the 'phage' integrase family. (366 aa)    
Predicted Functional Partners:
whiA
Putative sporulation regulatory protein; Involved in cell division and chromosome segregation.
  
    0.501
BLA_0646
COG0582: Integrase; Belongs to the 'phage' integrase family.
 
 
 
0.480
BLA_1508
COG1040: Predicted amidophosphoribosyltransferases.
   
    0.459
tyrA
COG0287: Prephenate dehydrogenase.
  
    0.447
BLA_0759
Hypothetical protein.
       0.438
BLA_0097
COG2135: Uncharacterized conserved protein; Belongs to the SOS response-associated peptidase family.
   
    0.426
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.416
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.416
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.