STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLA_0905COG1175: ABC-type sugar transport systems, permease components. (469 aa)    
Predicted Functional Partners:
BLA_0904
Putative sugar ABC transport system membrane protein; COG3833: ABC-type maltose transport systems, permease component.
 
 0.999
BLA_0906
Putative sugar-binding secreted protein; COG2182: Maltose-binding periplasmic proteins/domains.
 
 0.992
msiK
ATP binding protein of ABC transporter for sugars; COG3839: ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.974
BLA_0910
Permease of ABC transporter possibly for oligosaccharides; COG0395: ABC-type sugar transport system, permease component.
  
 0.958
BLA_0901
Putative ABC transport system membrane protein.
 
     0.820
pulA
Putative pullulanase; COG1523: Type II secretory pathway, pullulanase PulA and related glycosidases.
 
     0.796
BLA_0622
Putative sugar transport integral membrane protein; COG0395: ABC-type sugar transport system, permease component.
 
 
 0.727
BLA_0463
Probable permease of ABC transporter system for sugars; COG0395: ABC-type sugar transport system, permease component.
 
 
 0.703
BLA_0902
Haloacid dehalogenase-like hydrolase; COG1011: Predicted hydrolase (HAD superfamily).
 
    0.703
BLA_1047
Putative binding protein-dependent transporter; COG0395: ABC-type sugar transport system, permease component.
 
 
 0.694
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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