STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLA_0933Conserved hypothetical protein. (79 aa)    
Predicted Functional Partners:
BLA_0932
COG1396: Predicted transcriptional regulators.
       0.684
BLA_0931
COG1546: Uncharacterized protein (competence- and mitomycin-induced); Belongs to the CinA family.
       0.661
BLA_0935
RecX-like protein; Modulates RecA activity; Belongs to the RecX family.
 
     0.647
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.645
crgA
Membrane protein; Involved in cell division; Belongs to the CrgA family.
  
     0.633
BLA_0476
Permeases of the major facilitator superfamily.
  
     0.627
BLA_0336
COG1112: Superfamily I DNA and RNA helicases and helicase subunits.
  
     0.616
BLA_0190
Thymidine phosphorylase.
  
     0.605
BLA_0835
COG3173: Predicted aminoglycoside phosphotransferase.
  
     0.598
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558: Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.566
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.