STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLA_1182Cell wall integrity and stress response component 1 precursor. (227 aa)    
Predicted Functional Partners:
BLA_1173
Conserved hypothetical protein.
 
     0.789
BLA_0829
Potential cell surface flocculin.
  
     0.763
BLA_0625
Integral membrane protein.
  
     0.759
BLA_1171
COG0392: Predicted integral membrane protein.
 
     0.733
BLA_0336
COG1112: Superfamily I DNA and RNA helicases and helicase subunits.
  
     0.730
BLA_1540
Putative membrane protein.
  
     0.723
BLA_0626
Retinitis pigmentosa GTPase regulator-like protein; COG0724: RNA-binding proteins (RRM domain).
  
     0.694
BLA_1510
ABC-type transport system involved in resistance to organic solvents, permease component.
  
     0.674
BLA_1078
Glucan-binding protein B; COG3942: Surface antigen.
  
     0.663
BLA_1045
Glycosyl transferase family 2 protein.
  
     0.646
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.