STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLA_1435ErfK/YbiS/YcfS/YnhG precursor; COG1376: Uncharacterized protein conserved in bacteria. (499 aa)    
Predicted Functional Partners:
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.638
BLA_0246
Probable PfkB family carbohydrate (Sugar) kinase; COG0524: Sugar kinases, ribokinase family.
 
     0.487
BLA_0626
Retinitis pigmentosa GTPase regulator-like protein; COG0724: RNA-binding proteins (RRM domain).
  
     0.434
sufD
FeS assembly protein SufD; COG0719: ABC-type transport system involved in Fe-S cluster assembly, permease component.
  
    0.434
sufB
FeS assembly protein SufB; COG0719: ABC-type transport system involved in Fe-S cluster assembly, permease component.
  
    0.434
sufC
FeS assembly ATPase SufC; COG0396: ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
  
    0.424
BLA_0208
COG0744: Membrane carboxypeptidase (penicillin-binding protein).
  
   
 0.418
Your Current Organism:
Bifidobacterium animalis
NCBI taxonomy Id: 442563
Other names: B. animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis AD011, Bifidobacterium animalis subsp. lactis str. AD011, Bifidobacterium animalis subsp. lactis strain AD011, Bifidobacterium lactis AD011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.