Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO99977.1 | SFP01379.1 | SAMN05720591_13027 | SAMN05720591_13225 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Peroxiredoxin. | 0.561 |
SFO99977.1 | SFP01447.1 | SAMN05720591_13027 | SAMN05720591_13229 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Rhodanese-related sulfurtransferase. | 0.519 |
SFO99977.1 | SFP03065.1 | SAMN05720591_13027 | SAMN05720591_13427 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Homoserine dehydrogenase. | 0.653 |
SFO99977.1 | cysK | SAMN05720591_13027 | SAMN05720591_1466 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.776 |
SFO99977.1 | msrA | SAMN05720591_13027 | SAMN05720591_104131 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.530 |
SFP01379.1 | SFO99977.1 | SAMN05720591_13225 | SAMN05720591_13027 | Peroxiredoxin. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.561 |
SFP01379.1 | SFP01393.1 | SAMN05720591_13225 | SAMN05720591_13226 | Peroxiredoxin. | Cytochrome c-type biogenesis protein. | 0.994 |
SFP01379.1 | SFP01406.1 | SAMN05720591_13225 | SAMN05720591_13227 | Peroxiredoxin. | Hypothetical protein. | 0.766 |
SFP01379.1 | SFP01422.1 | SAMN05720591_13225 | SAMN05720591_13228 | Peroxiredoxin. | Uncharacterized conserved protein, DUF302 family. | 0.545 |
SFP01379.1 | SFP01447.1 | SAMN05720591_13225 | SAMN05720591_13229 | Peroxiredoxin. | Rhodanese-related sulfurtransferase. | 0.483 |
SFP01379.1 | SFP03065.1 | SAMN05720591_13225 | SAMN05720591_13427 | Peroxiredoxin. | Homoserine dehydrogenase. | 0.491 |
SFP01379.1 | cysK | SAMN05720591_13225 | SAMN05720591_1466 | Peroxiredoxin. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.511 |
SFP01379.1 | flgC | SAMN05720591_13225 | SAMN05720591_102103 | Peroxiredoxin. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.581 |
SFP01379.1 | msrA | SAMN05720591_13225 | SAMN05720591_104131 | Peroxiredoxin. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.502 |
SFP01379.1 | ydfQ | SAMN05720591_13225 | SAMN05720591_13233 | Peroxiredoxin. | Thioredoxin. | 0.541 |
SFP01393.1 | SFP01379.1 | SAMN05720591_13226 | SAMN05720591_13225 | Cytochrome c-type biogenesis protein. | Peroxiredoxin. | 0.994 |
SFP01393.1 | SFP01406.1 | SAMN05720591_13226 | SAMN05720591_13227 | Cytochrome c-type biogenesis protein. | Hypothetical protein. | 0.789 |
SFP01393.1 | SFP01422.1 | SAMN05720591_13226 | SAMN05720591_13228 | Cytochrome c-type biogenesis protein. | Uncharacterized conserved protein, DUF302 family. | 0.609 |
SFP01393.1 | SFP01447.1 | SAMN05720591_13226 | SAMN05720591_13229 | Cytochrome c-type biogenesis protein. | Rhodanese-related sulfurtransferase. | 0.457 |
SFP01393.1 | msrA | SAMN05720591_13226 | SAMN05720591_104131 | Cytochrome c-type biogenesis protein. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.493 |
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