STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_0516DNA mismatch endonuclease Vsr; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. (146 aa)    
Predicted Functional Partners:
GM18_0518
TIGRFAM: DNA-cytosine methyltransferase; KEGG: aac:Aaci_1132 DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase.
 
   
 0.949
GM18_0517
KEGG: rlg:Rleg_7070 hypothetical protein.
     
 0.810
GM18_0515
KEGG: cel:C06G3.2 Kinesin-Like Protein family member (klp-18).
       0.773
GM18_0519
KEGG: sus:Acid_1701 CopG/DNA-binding domain-containing protein.
       0.768
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
   
 
 0.665
GM18_0514
KEGG: ppd:Ppro_3744 nuclease; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein).
       0.661
GM18_0513
KEGG: cyc:PCC7424_2436 DEAD-like helicase; PFAM: type III restriction protein res subunit; SMART: helicase c2; DEAD-like helicase.
       0.616
GM18_0520
KEGG: bgl:bglu_1g03820 hypothetical protein.
       0.445
GM18_0521
Hypothetical protein; KEGG: dal:Dalk_2607 DNA repair photolyase-like protein.
       0.445
GM18_0522
Hypothetical protein; KEGG: ppd:Ppro_1122 HMG-I and HMG-Y, DNA-binding domain-containing protein.
       0.445
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.