STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_0603KEGG: gem:GM21_3548 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (224 aa)    
Predicted Functional Partners:
GM18_1810
PFAM: protein of unknown function DUF214; KEGG: geo:Geob_3517 protein of unknown function DUF214.
 
 0.950
GM18_0602
PFAM: protein of unknown function DUF214; KEGG: gem:GM21_3549 protein of unknown function DUF214.
 
 
 0.948
GM18_0601
PFAM: protein of unknown function DUF214; KEGG: gem:GM21_3550 protein of unknown function DUF214.
 
 
 0.925
GM18_2045
PFAM: protein of unknown function DUF214; KEGG: gem:GM21_2026 protein of unknown function DUF214.
 
 0.915
GM18_1707
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_0895 hypothetical protein.
 
 0.906
GM18_4122
PFAM: protein of unknown function DUF214; KEGG: rru:Rru_A2805 hypothetical protein.
 
 
 0.904
GM18_0604
PFAM: Protein of unknown function DUF2318, membrane; KEGG: gem:GM21_3547 membrane protein-like protein.
 
    0.894
GM18_4123
PFAM: protein of unknown function DUF214; KEGG: rru:Rru_A2806 hypothetical protein.
 
 
 0.880
GM18_2072
PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_2168 protein of unknown function DUF214.
 
 
 0.878
GM18_0605
KEGG: gem:GM21_3546 hypothetical protein.
       0.773
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.