STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_0605KEGG: gem:GM21_3546 hypothetical protein. (410 aa)    
Predicted Functional Partners:
GM18_0603
KEGG: gem:GM21_3548 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.773
GM18_0604
PFAM: Protein of unknown function DUF2318, membrane; KEGG: gem:GM21_3547 membrane protein-like protein.
       0.773
GM18_0606
KEGG: gbm:Gbem_3468 hypothetical protein.
       0.773
GM18_0607
KEGG: gem:GM21_3553 radical SAM domain protein; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.773
GM18_0608
KEGG: gem:GM21_3552 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.620
GM18_0599
KEGG: gem:GM21_3555 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.498
GM18_0600
KEGG: gem:GM21_3554 hypothetical protein.
       0.498
GM18_0601
PFAM: protein of unknown function DUF214; KEGG: gem:GM21_3550 protein of unknown function DUF214.
       0.498
GM18_0602
PFAM: protein of unknown function DUF214; KEGG: gem:GM21_3549 protein of unknown function DUF214.
       0.498
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.