STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_0890Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; KEGG: gbm:Gbem_1039 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein. (793 aa)    
Predicted Functional Partners:
GM18_0891
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; KEGG: gem:GM21_3221 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein.
 
 
 0.980
GM18_1089
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; Cache domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: gbm:Gbem_1227 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; Hpt domain protein.
 
 
0.971
GM18_2678
KEGG: gbm:Gbem_2810 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 
 0.968
GM18_2098
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; Cache domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: gem:GM21_2079 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; PAC repeat-containing protein; response regulator receiver.
 
 
0.963
GM18_0217
KEGG: gem:GM21_0057 histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein.
 
 
0.961
GM18_2824
TIGRFAM: PAS sensor protein; PFAM: Transcription regulator,histidine kinase sensor-like; extracellular solute-binding protein family 3; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; KEGG: gem:GM21_1283 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; response regulator receiver.
 
 
0.955
GM18_0454
TIGRFAM: PAS sensor protein; PFAM: Transcription regulator,histidine kinase sensor-like; PAS fold-4 domain protein; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dal:Dalk_0542 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein.
 
 
0.954
GM18_4312
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Protein of unknown function DUF3365; ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: gsu:GSU1555 sensory box histidine kinase/response regulator; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein.
 
 
0.954
GM18_2407
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: gur:Gura_3377 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein.
 
0.953
GM18_4080
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: gbm:Gbem_3617 multi-sensor hybrid histidine kinase; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein.
 
 
0.953
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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