STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_0931PFAM: NHL repeat containing protein; KEGG: gur:Gura_2758 NHL repeat-containing protein. (388 aa)    
Predicted Functional Partners:
GM18_0935
KEGG: gsu:GSU3226 cytochrome c family protein.
 
     0.891
GM18_0930
TIGRFAM: cytochrome C family protein; KEGG: gem:GM21_3163 cytochrome c family protein.
 
     0.839
GM18_0932
KEGG: gem:GM21_3161 cytochrome c family protein.
 
     0.833
GM18_1022
TIGRFAM: cytochrome C family protein; KEGG: gem:GM21_3108 cytochrome c family protein.
 
     0.750
GM18_0936
KEGG: gur:Gura_2749 hypothetical protein.
 
     0.734
GM18_0783
KEGG: gur:Gura_2749 hypothetical protein.
 
     0.724
GM18_1017
KEGG: gem:GM21_3113 hypothetical protein.
 
     0.724
GM18_0787
KEGG: gem:GM21_3157 cytochrome c family protein.
 
     0.723
GM18_0934
PFAM: NHL repeat containing protein; KEGG: gur:Gura_2755 NHL repeat-containing protein.
 
    
0.697
GM18_1107
Nitric-oxide reductase; KEGG: gbm:Gbem_1248 cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I.
  
 
 0.650
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.