STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_0964PFAM: Carbohydrate-binding CenC domain protein; KEGG: cfl:Cfla_0905 glycoside hydrolase family 10. (203 aa)    
Predicted Functional Partners:
GM18_0963
PFAM: glycosyl transferase group 1; KEGG: gur:Gura_2346 lipopolysaccharide biosynthesis protein-like protein.
       0.603
GM18_0961
KEGG: fsu:Fisuc_2572 hypothetical protein.
       0.553
GM18_0962
PFAM: glycosyl transferase group 1; KEGG: cyp:PCC8801_0042 polysaccharide biosynthesis protein.
       0.553
GM18_0965
KEGG: nwi:Nwi_0540 hypothetical protein.
       0.547
GM18_0960
KEGG: fsu:Fisuc_2572 hypothetical protein.
       0.523
GM18_0959
Hypothetical protein; KEGG: mvo:Mvol_1424 tRNA pseudouridine synthase D TruD.
       0.421
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.