STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_1336KEGG: gbm:Gbem_1501 Electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit. (441 aa)    
Predicted Functional Partners:
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 0.999
GM18_1335
KEGG: gem:GM21_2716 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
 0.998
GM18_0395
KEGG: gme:Gmet_2067 electron transfer flavoprotein subunit beta; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
 0.994
GM18_1214
KEGG: gem:GM21_2928 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
 0.994
GM18_1873
KEGG: gbm:Gbem_2085 Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
 0.994
GM18_0382
KEGG: gme:Gmet_2263 electron transfer flavoprotein subunit beta; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
 0.992
GM18_1192
KEGG: gbm:Gbem_1333 Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
 0.992
GM18_1290
KEGG: gbm:Gbem_2830 Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
 0.992
GM18_3214
KEGG: gur:Gura_3554 electron transfer flavoprotein beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
 
 0.992
GM18_2747
Acyl transferase; KEGG: amd:AMED_4604 type I polyketide synthase; PFAM: Acyl transferase; short-chain dehydrogenase/reductase SDR; Beta-ketoacyl synthase; 2-nitropropane dioxygenase NPD; phosphopantetheine-binding; SMART: Polyketide synthase, acyl transferase domain; Polyketide synthase/Fatty acid synthase, KR.
  
 0.973
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.