STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_1558KEGG: gur:Gura_2022 fibronectin, type III domain-containing protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein. (472 aa)    
Predicted Functional Partners:
GM18_4376
PFAM: glycoside hydrolase family 19; KEGG: abm:p3ABSDF0006 putative chitinase.
  
    0.759
GM18_3531
KEGG: ade:Adeh_1077 hypothetical protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.
 
  
 0.745
GM18_1557
TIGRFAM: cell wall/surface repeat protein; PFAM: Fibronectin type III domain protein; Listeria/Bacterioides repeat-containing protein; KEGG: geo:Geob_1283 outer membrane adhesin like proteiin; SMART: Fibronectin type III domain protein.
  
  
 0.697
GM18_1556
KEGG: gur:Gura_0768 hypothetical protein.
 
     0.650
GM18_0793
KEGG: gbm:Gbem_0896 NLP/P60 protein; PFAM: NLP/P60 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
    0.550
GM18_3492
PFAM: NLP/P60 protein; Sporulation domain-containing protein; KEGG: gbm:Gbem_1003 NLP/P60 protein.
  
    0.540
GM18_2230
KEGG: gbm:Gbem_1979 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein.
  
    0.529
GM18_1555
PFAM: outer membrane chaperone Skp (OmpH); KEGG: glo:Glov_0761 outer membrane chaperone Skp (OmpH).
       0.509
GM18_3452
PFAM: NLP/P60 protein; KEGG: gbm:Gbem_3368 NLP/P60 protein.
  
    0.475
GM18_3715
PFAM: NLP/P60 protein; KEGG: gem:GM21_0652 hypothetical protein.
  
    0.475
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.