STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_1872PFAM: GCN5-related N-acetyltransferase; KEGG: gbm:Gbem_2084 GCN5-related N-acetyltransferase. (267 aa)    
Predicted Functional Partners:
GM18_1871
KEGG: gbm:Gbem_2083 Radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
    0.855
GM18_1864
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
   
    0.551
GM18_0942
PFAM: protein of unknown function DUF1778; KEGG: ppd:Ppro_3599 hypothetical protein.
   
   0.541
GM18_2414
PFAM: protein of unknown function DUF1778; KEGG: sat:SYN_02692 putative cytoplasmic protein.
   
   0.541
GM18_3380
KEGG: gem:GM21_0953 hypothetical protein.
  
     0.534
GM18_3260
KEGG: gbm:Gbem_1180 hypothetical protein.
  
     0.523
GM18_1873
KEGG: gbm:Gbem_2085 Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.
       0.508
GM18_3095
KEGG: gbm:Gbem_3125 histone deacetylase superfamily; PFAM: histone deacetylase superfamily.
  
  
 0.502
GM18_3658
KEGG: gem:GM21_0705 conserved repeat domain protein.
 
     0.499
GM18_2008
SMART: heat shock protein DnaJ domain protein; KEGG: gbm:Gbem_2220 heat shock protein DnaJ domain protein.
  
     0.498
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.