STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_1883PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: gur:Gura_4251 RNA-directed DNA polymerase (reverse transcriptase). (468 aa)    
Predicted Functional Partners:
GM18_1292
PFAM: RelA/SpoT domain protein; KEGG: gem:GM21_2888 RelA/SpoT domain protein.
   
    0.508
GM18_1881
KEGG: gbm:Gbem_0321 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein.
       0.407
GM18_1882
PFAM: protein of unknown function DUF107; KEGG: gem:GM21_0296 protein of unknown function DUF107.
       0.407
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.