STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM18_3304TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: gbm:Gbem_3269 putative signal transduction protein; SMART: metal-dependent phosphohydrolase HD region. (274 aa)    
Predicted Functional Partners:
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.570
GM18_4194
Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
 
     0.521
mnmA-2
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
  
    0.482
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.475
GM18_4274
KEGG: gem:GM21_3928 inhibitor of MCP methylation CheC-like protein.
 
     0.475
GM18_0712
KEGG: gbm:Gbem_0813 hypothetical protein.
  
     0.464
GM18_4185
PFAM: MotA/TolQ/ExbB proton channel; KEGG: gbm:Gbem_3752 MotA/TolQ/ExbB proton channel.
 
     0.463
fliE
KEGG: gem:GM21_3923 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE.
 
    0.416
GM18_4257
KEGG: gem:GM21_3911 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein.
 
    0.415
GM18_3366
KEGG: gem:GM21_0966 inhibitor of MCP methylation CheC-like protein.
 
     0.414
Your Current Organism:
Geobacter sp. M18
NCBI taxonomy Id: 443143
Other names: G. sp. M18
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