STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_0678PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0665 4Fe-4S ferredoxin iron-sulfur binding domain protein. (302 aa)    
Predicted Functional Partners:
GM21_2638
Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gur:Gura_3374 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.993
GM21_0677
KEGG: gbm:Gbem_0664 polysulphide reductase-like protein.
 
 0.984
GM21_2640
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: gbm:Gbem_1573 formate dehydrogenase, gamma subunit.
 
 0.981
GM21_0673
PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gbm:Gbem_0660 molybdopterin oxidoreductase.
  
 
 0.950
GM21_1955
Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gur:Gura_3388 formate dehydrogenase, alpha subunit.
 
 
 0.944
GM21_2639
PFAM: Formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1574 formate dehydrogenase transmembrane domain protein.
  
  
 
0.921
GM21_0672
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gbm:Gbem_0659 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.915
GM21_1956
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_2266 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
  
 
0.913
GM21_2236
PFAM: Polysulphide reductase NrfD; KEGG: gbm:Gbem_1984 polysulphide reductase, NrfD.
 
 0.912
GM21_1957
PFAM: Polysulphide reductase NrfD; KEGG: gbm:Gbem_2265 polysulphide reductase NrfD.
 
 0.908
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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