STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_0696PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_0684 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)    
Predicted Functional Partners:
GM21_1381
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: gbm:Gbem_2832 acyl-CoA dehydrogenase domain protein.
 
 0.972
GM21_2090
KEGG: gbm:Gbem_2127 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.963
GM21_2865
PFAM: Thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: gbm:Gbem_1415 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.963
GM21_2866
PFAM: CoA-binding domain protein; KEGG: gbm:Gbem_1414 CoA-binding domain protein.
  
 
 0.924
GM21_0163
TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gbm:Gbem_0181 quinone oxidoreductase, YhdH/YhfP family.
  
 0.918
GM21_0571
TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gbm:Gbem_0558 methylmalonyl-CoA epimerase.
     
 0.905
GM21_1947
KEGG: gbm:Gbem_2276 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase.
    
 0.904
GM21_0316
Methylmalonyl-CoA carboxytransferase; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; KEGG: gbm:Gbem_0334 conserved carboxylase domain protein.
     
 0.901
GM21_3278
KEGG: gbm:Gbem_0982 BioD-like protein N-terminal domain of phosphotransacetylase-like protein.
     
 0.901
GM21_2796
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1457 enoyl-CoA hydratase/isomerase.
 
 
0.871
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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