STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_0774KEGG: glo:Glov_1177 cytochrome c family protein. (485 aa)    
Predicted Functional Partners:
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
   0.797
GM21_0150
TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gbm:Gbem_0168 proton-translocating NADH-quinone oxidoreductase, chain M.
    
 
 0.747
GM21_3998
KEGG: gbm:Gbem_3914 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
    
 
 0.747
GM21_0690
PFAM: cytochrome B561; KEGG: gbm:Gbem_0677 cytochrome b561.
 
     0.746
GM21_0773
KEGG: gbm:Gbem_0758 hypothetical protein.
 
    
0.572
GM21_0263
KEGG: gbm:Gbem_0278 hypothetical protein.
   
  0.534
GM21_2374
KEGG: sfu:Sfum_3890 hypothetical protein.
   
  0.534
GM21_0984
KEGG: gur:Gura_1629 hypothetical protein.
    
 0.509
GM21_1007
KEGG: bcj:BCAL1301 hypothetical protein.
    
 0.509
GM21_3539
KEGG: gbm:Gbem_1158 hypothetical protein.
    
 0.509
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.