Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GM21_0788 | GM21_0789 | Hypothetical protein; KEGG: mfa:Mfla_1177 XRE family transcriptional regulator. | Hypothetical protein. | 0.773 |
GM21_0788 | GM21_0790 | Hypothetical protein; KEGG: mfa:Mfla_1177 XRE family transcriptional regulator. | PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmw:Mmwyl1_2969 phosphoadenosine phosphosulfate reductase. | 0.773 |
GM21_0788 | GM21_0791 | Hypothetical protein; KEGG: mfa:Mfla_1177 XRE family transcriptional regulator. | Hypothetical protein. | 0.689 |
GM21_0788 | GM21_0792 | Hypothetical protein; KEGG: mfa:Mfla_1177 XRE family transcriptional regulator. | Hypothetical protein. | 0.678 |
GM21_0788 | GM21_0793 | Hypothetical protein; KEGG: mfa:Mfla_1177 XRE family transcriptional regulator. | ATP-dependent Lon-type protease-like protein; KEGG: tmz:Tmz1t_0301 putative ATP-dependent Lon protease. | 0.806 |
GM21_0789 | GM21_0788 | Hypothetical protein. | Hypothetical protein; KEGG: mfa:Mfla_1177 XRE family transcriptional regulator. | 0.773 |
GM21_0789 | GM21_0790 | Hypothetical protein. | PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmw:Mmwyl1_2969 phosphoadenosine phosphosulfate reductase. | 0.782 |
GM21_0789 | GM21_0791 | Hypothetical protein. | Hypothetical protein. | 0.689 |
GM21_0789 | GM21_0792 | Hypothetical protein. | Hypothetical protein. | 0.702 |
GM21_0789 | GM21_0793 | Hypothetical protein. | ATP-dependent Lon-type protease-like protein; KEGG: tmz:Tmz1t_0301 putative ATP-dependent Lon protease. | 0.647 |
GM21_0790 | GM21_0788 | PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmw:Mmwyl1_2969 phosphoadenosine phosphosulfate reductase. | Hypothetical protein; KEGG: mfa:Mfla_1177 XRE family transcriptional regulator. | 0.773 |
GM21_0790 | GM21_0789 | PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmw:Mmwyl1_2969 phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.782 |
GM21_0790 | GM21_0791 | PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmw:Mmwyl1_2969 phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.929 |
GM21_0790 | GM21_0792 | PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmw:Mmwyl1_2969 phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.702 |
GM21_0790 | GM21_0793 | PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmw:Mmwyl1_2969 phosphoadenosine phosphosulfate reductase. | ATP-dependent Lon-type protease-like protein; KEGG: tmz:Tmz1t_0301 putative ATP-dependent Lon protease. | 0.915 |
GM21_0791 | GM21_0788 | Hypothetical protein. | Hypothetical protein; KEGG: mfa:Mfla_1177 XRE family transcriptional regulator. | 0.689 |
GM21_0791 | GM21_0789 | Hypothetical protein. | Hypothetical protein. | 0.689 |
GM21_0791 | GM21_0790 | Hypothetical protein. | PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmw:Mmwyl1_2969 phosphoadenosine phosphosulfate reductase. | 0.929 |
GM21_0791 | GM21_0792 | Hypothetical protein. | Hypothetical protein. | 0.802 |
GM21_0791 | GM21_0793 | Hypothetical protein. | ATP-dependent Lon-type protease-like protein; KEGG: tmz:Tmz1t_0301 putative ATP-dependent Lon protease. | 0.938 |
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