STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_2136KEGG: gbm:Gbem_2082 ADP-ribosyl-(dinitrogen reductase) hydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1. (301 aa)    
Predicted Functional Partners:
GM21_2137
NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase; PFAM: Dinitrogenase reductase ADP-ribosyltransferase; KEGG: gbm:Gbem_2081 dinitrogenase reductase ADP-ribosyltransferase.
 
   
 0.804
GM21_0336
PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: gbm:Gbem_0355 Appr-1-p processing domain protein.
    
 0.799
GM21_1183
PFAM: nitrogen regulatory protein P-II; KEGG: gbm:Gbem_3078 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.724
GM21_2709
PFAM: nitrogen regulatory protein P-II; KEGG: gbm:Gbem_1507 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.724
GM21_2139
TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_2079 ferredoxin III, nif-specific.
 
     0.654
GM21_2140
TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: gbm:Gbem_2078 nitrogen fixation protein NifX.
 
   
 0.556
GM21_2144
KEGG: gbm:Gbem_2075 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1.
 
   
 0.443
GM21_2143
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
   
 0.442
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
   
 0.424
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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