STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_2246PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1971 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (325 aa)    
Predicted Functional Partners:
GM21_2247
PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: gbm:Gbem_1970 oxidoreductase FAD-binding domain protein.
  
 0.975
GM21_2248
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gbm:Gbem_1969 NADH ubiquinone oxidoreductase 20 kDa subunit.
 
   
 0.954
GM21_2249
PFAM: nickel-dependent hydrogenase large subunit; KEGG: gbm:Gbem_1968 nickel-dependent hydrogenase large subunit.
 
   
 0.951
GM21_0025
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gbm:Gbem_0026 oxidoreductase FAD/NAD(P)-binding domain protein.
  
 0.908
GM21_1314
PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gbm:Gbem_2911 protein of unknown function DUF162.
  
 
 0.786
GM21_0027
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0028 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
   
 0.734
GM21_0030
CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gbm:Gbem_0031 protein of unknown function DUF224 cysteine-rich region domain protein.
 
 
 0.707
GM21_0029
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_0030 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
   
 0.702
GM21_0028
PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: gbm:Gbem_0029 methyl-viologen-reducing hydrogenase delta subunit.
 
   
 0.699
GM21_0031
KEGG: gbm:Gbem_0032 heterodisulfide reductase subunit.
 
   
 0.636
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.