STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_2281PFAM: Integral membrane protein TerC; KEGG: gbm:Gbem_1936 integral membrane protein TerC. (250 aa)    
Predicted Functional Partners:
GM21_3260
PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: gbm:Gbem_1000 CBS domain containing protein.
 
    0.818
GM21_2280
KEGG: gbm:Gbem_2938 import inner membrane translocase subunit Tim44.
       0.686
GM21_0967
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: gbm:Gbem_3282 protein of unknown function DUF21.
 
    0.651
GM21_2279
PFAM: protein of unknown function UPF0182; KEGG: ppd:Ppro_3567 hypothetical protein.
       0.604
GM21_2278
KEGG: gbm:Gbem_1937 hypothetical protein.
       0.511
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
    0.508
htpX-2
PFAM: peptidase M48 Ste24p; KEGG: gbm:Gbem_1935 peptidase M48 Ste24p; Belongs to the peptidase M48B family.
       0.462
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.