STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_2681Conserved hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (262 aa)    
Predicted Functional Partners:
GM21_3595
KEGG: gbm:Gbem_3529 hypothetical protein.
 
 
 0.859
GM21_1437
KEGG: geo:Geob_2733 putative disulfide oxidoreductase.
  
 
 0.735
GM21_2679
KEGG: gbm:Gbem_2345 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein.
 
     0.674
GM21_2676
KEGG: gbm:Gbem_2342 hypothetical protein.
 
   
 0.565
GM21_2680
KEGG: gbm:Gbem_2346 hypothetical protein.
       0.553
GM21_3927
KEGG: gbm:Gbem_3843 CheC, inhibitor of MCP methylation.
  
 
   0.545
GM21_2677
KEGG: gbm:Gbem_2343 hypothetical protein.
     
 0.504
GM21_3029
KEGG: gbm:Gbem_1254 ATPase involved in chromosome partitioning-like protein.
  
     0.503
GM21_2665
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: gbm:Gbem_1550 type IV pilus secretin PilQ.
 
  
 0.498
GM21_2678
KEGG: gbm:Gbem_2344 hypothetical protein.
       0.495
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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