STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_2808PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gbm:Gbem_1446 protein of unknown function DUF224 cysteine-rich region domain protein. (383 aa)    
Predicted Functional Partners:
GM21_2809
KEGG: gbm:Gbem_1445 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
  
 0.847
GM21_2810
KEGG: gbm:Gbem_1444 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase.
 
 
   0.819
GM21_1314
PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gbm:Gbem_2911 protein of unknown function DUF162.
 
 
0.805
GM21_2807
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_1447 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
   
 0.796
GM21_2806
Contains selenocysteine; PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: gbm:Gbem_1448 methyl-viologen-reducing hydrogenase delta subunit.
 
   
 0.679
GM21_1315
PFAM: protein of unknown function DUF162; KEGG: gbm:Gbem_2910 protein of unknown function DUF162.
  
 
 0.592
GM21_2811
TIGRFAM: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbm:Gbem_1443 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase.
 
  
 0.577
GM21_3856
PFAM: protein of unknown function DUF1121; KEGG: gbm:Gbem_3772 protein of unknown function DUF1121.
  
 
 0.575
GM21_1610
KEGG: gbm:Gbem_2619 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
  
 0.533
GM21_0577
PFAM: FAD linked oxidase domain protein; KEGG: gbm:Gbem_0564 FAD linked oxidase domain protein.
 
  
 0.469
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.