STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_3213PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_1049 glycosyl transferase family 2. (256 aa)    
Predicted Functional Partners:
GM21_3211
KEGG: ppd:Ppro_2695 hypothetical protein.
 
     0.678
GM21_3212
KEGG: gbm:Gbem_1050 hypothetical protein.
  
    0.663
GM21_3950
PFAM: glycosyl transferase family 39; KEGG: gbm:Gbem_3865 glycosyl transferase family 39.
  
 0.658
GM21_3210
KEGG: scl:sce4489 hypothetical protein.
 
  
 0.597
GM21_2593
PFAM: glycosyl transferase group 1; KEGG: ypy:YPK_3184 glycosyl transferase group 1.
  
   0.445
GM21_2467
PFAM: glycosyl transferase group 1; KEGG: gbm:Gbem_1780 glycosyl transferase group 1.
  
   0.443
GM21_2453
PFAM: glycosyl transferase family 2; KEGG: ppd:Ppro_2467 glycosyl transferase family protein.
 
  
 0.439
GM21_3823
PFAM: glycosyl transferase family 2; Methyltransferase type 11; TPR repeat-containing protein; Methionine biosynthesis MetW protein; Methyltransferase type 12; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gbm:Gbem_3740 glycosyl transferase family 2.
 
 
 0.438
GM21_3380
KEGG: gbm:Gbem_0880 hypothetical protein.
  
  
 0.419
GM21_3501
PFAM: glycosyl transferase family 2; KEGG: geo:Geob_1223 glycosyl transferase family 2.
 
     0.419
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.