node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GM21_1929 | GM21_3489 | GM21_1929 | GM21_3489 | PFAM: CBS domain containing protein; Polynucleotide adenylyltransferase region; phosphoesterase DHHA1; phosphoesterase RecJ domain protein; SMART: CBS domain containing protein; KEGG: gbm:Gbem_2294 CBS domain containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | 0.449 |
GM21_2125 | GM21_3489 | GM21_2125 | GM21_3489 | PFAM: outer membrane chaperone Skp (OmpH); KEGG: gbm:Gbem_2093 outer membrane chaperone Skp (OmpH). | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | 0.429 |
GM21_2125 | atpF-2 | GM21_2125 | GM21_4040 | PFAM: outer membrane chaperone Skp (OmpH); KEGG: gbm:Gbem_2093 outer membrane chaperone Skp (OmpH). | H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.618 |
GM21_2125 | rplS | GM21_2125 | GM21_3488 | PFAM: outer membrane chaperone Skp (OmpH); KEGG: gbm:Gbem_2093 outer membrane chaperone Skp (OmpH). | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.420 |
GM21_3489 | GM21_1929 | GM21_3489 | GM21_1929 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | PFAM: CBS domain containing protein; Polynucleotide adenylyltransferase region; phosphoesterase DHHA1; phosphoesterase RecJ domain protein; SMART: CBS domain containing protein; KEGG: gbm:Gbem_2294 CBS domain containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.449 |
GM21_3489 | GM21_2125 | GM21_3489 | GM21_2125 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | PFAM: outer membrane chaperone Skp (OmpH); KEGG: gbm:Gbem_2093 outer membrane chaperone Skp (OmpH). | 0.429 |
GM21_3489 | GM21_3492 | GM21_3489 | GM21_3492 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | KEGG: gbm:Gbem_3430 KH, type 1, domain protein; Belongs to the UPF0109 family. | 0.844 |
GM21_3489 | atpF-2 | GM21_3489 | GM21_4040 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.472 |
GM21_3489 | ffh | GM21_3489 | GM21_3494 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] | 0.497 |
GM21_3489 | rimM | GM21_3489 | GM21_3491 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.821 |
GM21_3489 | rplS | GM21_3489 | GM21_3488 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.588 |
GM21_3489 | rpsP | GM21_3489 | GM21_3493 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: gbm:Gbem_3431 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.664 |
GM21_3489 | trmD | GM21_3489 | GM21_3490 | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.983 |
GM21_3492 | GM21_3489 | GM21_3492 | GM21_3489 | KEGG: gbm:Gbem_3430 KH, type 1, domain protein; Belongs to the UPF0109 family. | KEGG: gbm:Gbem_3427 uncharacterized protein-like protein. | 0.844 |
GM21_3492 | ffh | GM21_3492 | GM21_3494 | KEGG: gbm:Gbem_3430 KH, type 1, domain protein; Belongs to the UPF0109 family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] | 0.542 |
GM21_3492 | rimM | GM21_3492 | GM21_3491 | KEGG: gbm:Gbem_3430 KH, type 1, domain protein; Belongs to the UPF0109 family. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.959 |
GM21_3492 | rplS | GM21_3492 | GM21_3488 | KEGG: gbm:Gbem_3430 KH, type 1, domain protein; Belongs to the UPF0109 family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.929 |
GM21_3492 | rpsP | GM21_3492 | GM21_3493 | KEGG: gbm:Gbem_3430 KH, type 1, domain protein; Belongs to the UPF0109 family. | TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: gbm:Gbem_3431 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.974 |
GM21_3492 | trmD | GM21_3492 | GM21_3490 | KEGG: gbm:Gbem_3430 KH, type 1, domain protein; Belongs to the UPF0109 family. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.832 |
atpF-2 | GM21_2125 | GM21_4040 | GM21_2125 | H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | PFAM: outer membrane chaperone Skp (OmpH); KEGG: gbm:Gbem_2093 outer membrane chaperone Skp (OmpH). | 0.618 |