node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GM21_1301 | GM21_3594 | GM21_1301 | GM21_3594 | GTP-binding protein HSR1-related protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.937 |
GM21_1301 | rpoB | GM21_1301 | GM21_3335 | GTP-binding protein HSR1-related protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.526 |
GM21_1301 | truB | GM21_1301 | GM21_2978 | GTP-binding protein HSR1-related protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.867 |
GM21_2463 | GM21_3594 | GM21_2463 | GM21_3594 | PFAM: formyl transferase domain protein; KEGG: gbm:Gbem_1784 formyl transferase domain protein. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.958 |
GM21_2463 | fmt | GM21_2463 | GM21_0649 | PFAM: formyl transferase domain protein; KEGG: gbm:Gbem_1784 formyl transferase domain protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.917 |
GM21_2463 | ligA | GM21_2463 | GM21_2948 | PFAM: formyl transferase domain protein; KEGG: gbm:Gbem_1784 formyl transferase domain protein. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.429 |
GM21_2463 | pheT | GM21_2463 | GM21_2225 | PFAM: formyl transferase domain protein; KEGG: gbm:Gbem_1784 formyl transferase domain protein. | TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: gbm:Gbem_1995 phenylalanyl-tRNA synthetase, beta subunit. | 0.581 |
GM21_2463 | rlmN | GM21_2463 | GM21_2558 | PFAM: formyl transferase domain protein; KEGG: gbm:Gbem_1784 formyl transferase domain protein. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.516 |
GM21_2463 | truB | GM21_2463 | GM21_2978 | PFAM: formyl transferase domain protein; KEGG: gbm:Gbem_1784 formyl transferase domain protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.409 |
GM21_2599 | GM21_3594 | GM21_2599 | GM21_3594 | PFAM: formyl transferase domain protein; KEGG: bcs:BCAN_A0529 bifunctional polymyxin resistance ArnA protein. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.958 |
GM21_2599 | ligA | GM21_2599 | GM21_2948 | PFAM: formyl transferase domain protein; KEGG: bcs:BCAN_A0529 bifunctional polymyxin resistance ArnA protein. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.429 |
GM21_2599 | pheT | GM21_2599 | GM21_2225 | PFAM: formyl transferase domain protein; KEGG: bcs:BCAN_A0529 bifunctional polymyxin resistance ArnA protein. | TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: gbm:Gbem_1995 phenylalanyl-tRNA synthetase, beta subunit. | 0.494 |
GM21_2599 | rlmN | GM21_2599 | GM21_2558 | PFAM: formyl transferase domain protein; KEGG: bcs:BCAN_A0529 bifunctional polymyxin resistance ArnA protein. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.516 |
GM21_2599 | truB | GM21_2599 | GM21_2978 | PFAM: formyl transferase domain protein; KEGG: bcs:BCAN_A0529 bifunctional polymyxin resistance ArnA protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.409 |
GM21_3594 | GM21_1301 | GM21_3594 | GM21_1301 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | GTP-binding protein HSR1-related protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.937 |
GM21_3594 | GM21_2463 | GM21_3594 | GM21_2463 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | PFAM: formyl transferase domain protein; KEGG: gbm:Gbem_1784 formyl transferase domain protein. | 0.958 |
GM21_3594 | GM21_2599 | GM21_3594 | GM21_2599 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | PFAM: formyl transferase domain protein; KEGG: bcs:BCAN_A0529 bifunctional polymyxin resistance ArnA protein. | 0.958 |
GM21_3594 | fmt | GM21_3594 | GM21_0649 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.958 |
GM21_3594 | ligA | GM21_3594 | GM21_2948 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.946 |
GM21_3594 | nusA | GM21_3594 | GM21_2983 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.934 |