STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM21_3701KEGG: dal:Dalk_3580 hypothetical protein. (159 aa)    
Predicted Functional Partners:
GM21_3697
Hypothetical protein; KEGG: spc:Sputcn32_0166 putative integrase protein.
 
     0.858
GM21_3702
KEGG: dal:Dalk_3581 putative transcriptional regulator, Nlp.
 
     0.831
GM21_3698
KEGG: hdu:HD1532 hypothetical protein.
       0.773
GM21_3699
Hypothetical protein.
       0.773
GM21_3700
Hypothetical protein.
       0.773
GM21_3696
SMART: AAA ATPase; KEGG: mfa:Mfla_2717 phage-like protein.
 
     0.739
GM21_3692
Hypothetical protein.
       0.577
GM21_3693
Hypothetical protein.
       0.577
GM21_3694
Hypothetical protein.
       0.577
GM21_3695
Hypothetical protein.
       0.577
Your Current Organism:
Geobacter sp. M21
NCBI taxonomy Id: 443144
Other names: G. sp. M21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.