Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GM21_4058 | GM21_4059 | GM21_4058 | GM21_4059 | KEGG: gbm:Gbem_3972 hypothetical protein. | KEGG: gbm:Gbem_3973 hypothetical protein. | 0.697 |
GM21_4058 | GM21_4060 | GM21_4058 | GM21_4060 | KEGG: gbm:Gbem_3972 hypothetical protein. | KEGG: gbm:Gbem_3974 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.688 |
GM21_4058 | rnj | GM21_4058 | GM21_4057 | KEGG: gbm:Gbem_3972 hypothetical protein. | Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.617 |
GM21_4059 | GM21_4058 | GM21_4059 | GM21_4058 | KEGG: gbm:Gbem_3973 hypothetical protein. | KEGG: gbm:Gbem_3972 hypothetical protein. | 0.697 |
GM21_4059 | GM21_4060 | GM21_4059 | GM21_4060 | KEGG: gbm:Gbem_3973 hypothetical protein. | KEGG: gbm:Gbem_3974 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.781 |
GM21_4059 | rnj | GM21_4059 | GM21_4057 | KEGG: gbm:Gbem_3973 hypothetical protein. | Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.549 |
GM21_4060 | GM21_4058 | GM21_4060 | GM21_4058 | KEGG: gbm:Gbem_3974 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | KEGG: gbm:Gbem_3972 hypothetical protein. | 0.688 |
GM21_4060 | GM21_4059 | GM21_4060 | GM21_4059 | KEGG: gbm:Gbem_3974 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | KEGG: gbm:Gbem_3973 hypothetical protein. | 0.781 |
GM21_4060 | rnj | GM21_4060 | GM21_4057 | KEGG: gbm:Gbem_3974 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.583 |
rnj | GM21_4058 | GM21_4057 | GM21_4058 | Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | KEGG: gbm:Gbem_3972 hypothetical protein. | 0.617 |
rnj | GM21_4059 | GM21_4057 | GM21_4059 | Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | KEGG: gbm:Gbem_3973 hypothetical protein. | 0.549 |
rnj | GM21_4060 | GM21_4057 | GM21_4060 | Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | KEGG: gbm:Gbem_3974 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.583 |