node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GM21_1307 | GM21_1355 | GM21_1307 | GM21_1355 | PFAM: Saccharopine dehydrogenase; KEGG: gbm:Gbem_2918 saccharopine dehydrogenase. | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | 0.922 |
GM21_1307 | GM21_1821 | GM21_1307 | GM21_1821 | PFAM: Saccharopine dehydrogenase; KEGG: gbm:Gbem_2918 saccharopine dehydrogenase. | KEGG: gbm:Gbem_2398 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein. | 0.900 |
GM21_1307 | lysA | GM21_1307 | GM21_4145 | PFAM: Saccharopine dehydrogenase; KEGG: gbm:Gbem_2918 saccharopine dehydrogenase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.922 |
GM21_1355 | GM21_1307 | GM21_1355 | GM21_1307 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | PFAM: Saccharopine dehydrogenase; KEGG: gbm:Gbem_2918 saccharopine dehydrogenase. | 0.922 |
GM21_1355 | GM21_1821 | GM21_1355 | GM21_1821 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | KEGG: gbm:Gbem_2398 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein. | 0.805 |
GM21_1355 | GM21_3019 | GM21_1355 | GM21_3019 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | KEGG: gbm:Gbem_1264 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. | 0.674 |
GM21_1355 | atpA | GM21_1355 | GM21_4037 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.524 |
GM21_1355 | dapA | GM21_1355 | GM21_4144 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.891 |
GM21_1355 | dapF | GM21_1355 | GM21_0339 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.941 |
GM21_1355 | dapL | GM21_1355 | GM21_4142 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | Aminotransferase class I and II; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.742 |
GM21_1355 | lysA | GM21_1355 | GM21_4145 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.900 |
GM21_1355 | murE | GM21_1355 | GM21_0503 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.914 |
GM21_1821 | GM21_1307 | GM21_1821 | GM21_1307 | KEGG: gbm:Gbem_2398 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein. | PFAM: Saccharopine dehydrogenase; KEGG: gbm:Gbem_2918 saccharopine dehydrogenase. | 0.900 |
GM21_1821 | GM21_1355 | GM21_1821 | GM21_1355 | KEGG: gbm:Gbem_2398 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein. | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | 0.805 |
GM21_1821 | lysA | GM21_1821 | GM21_4145 | KEGG: gbm:Gbem_2398 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.805 |
GM21_3019 | GM21_1355 | GM21_3019 | GM21_1355 | KEGG: gbm:Gbem_1264 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gbm:Gbem_2859 Orn/DAP/Arg decarboxylase 2. | 0.674 |
GM21_3019 | dapA | GM21_3019 | GM21_4144 | KEGG: gbm:Gbem_1264 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.727 |
GM21_3019 | dapB | GM21_3019 | GM21_4143 | KEGG: gbm:Gbem_1264 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. | 0.743 |
GM21_3019 | dapF | GM21_3019 | GM21_0339 | KEGG: gbm:Gbem_1264 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.561 |
GM21_3019 | lysA | GM21_3019 | GM21_4145 | KEGG: gbm:Gbem_1264 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.841 |