STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45760.1COG1653 ABC-type sugar transport system, periplasmic component. (364 aa)    
Predicted Functional Partners:
EDM45761.1
COG1653 ABC-type sugar transport system, periplasmic component.
     0.994
EDM45990.1
COG0395 ABC-type sugar transport system, permease component.
 
 0.976
EDM45844.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.960
EDM45845.1
ABC transporter-like protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.959
EDM45988.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.954
EDM45989.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.954
EDM49210.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
  
 0.857
EDM48103.1
COG0395 ABC-type sugar transport system, permease component.
  
 0.856
EDM45991.1
COG5477 Predicted small integral membrane protein.
 
     0.788
EDM49211.1
COG1175 ABC-type sugar transport systems, permease components.
  
 0.783
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.