STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM48817.1COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (213 aa)    
Predicted Functional Partners:
EDM48242.1
PAS; COG0642 Signal transduction histidine kinase.
 
 0.983
EDM49858.1
COG0642 Signal transduction histidine kinase.
 
 
0.977
EDM48215.1
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
  
 0.971
EDM48818.1
COG4564 Signal transduction histidine kinase.
 
  
  0.928
EDM46729.1
COG0591 Na+/proline symporter.
   
 0.911
EDM48386.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
 
 
 0.895
EDM46856.1
COG0642 Signal transduction histidine kinase.
 
 
 0.890
EDM47407.1
COG0642 Signal transduction histidine kinase.
 
 
 0.884
EDM48501.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
 0.844
EDM48830.1
Serine/threonine kinase with two-component sensor domain; COG0515 Serine/threonine protein kinase.
  
 0.836
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.