STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM46549.1Hypothetical protein; COG0392 Predicted integral membrane protein. (352 aa)    
Predicted Functional Partners:
EDM46550.1
Membrane-associated protein; COG0438 Glycosyltransferase.
 
  
 0.935
EDM46548.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
       0.583
EDM46761.1
Hypothetical protein.
 
     0.562
EDM46551.1
Hypothetical protein.
       0.535
EDM49271.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.483
EDM45904.1
Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria.
  
     0.473
EDM49311.1
Hypothetical protein; COG0517 FOG: CBS domain.
  
     0.465
EDM48120.1
Cyclic nucleotide-binding protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
     0.461
EDM46897.1
COG1388 FOG: LysM repeat.
  
     0.458
EDM47976.1
COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
 
    0.441
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.